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Public data and resource sharing links

Latest Genome Sequences released on NCBI Bioproject site

VCF2Arlequin

(with permission - requests can be addressed to Nicolas Feau feaunico@mail.ubc.ca)

Fungal cultures generated by TAIGA

View in CBS collection 

M. populicola (strain p02.02b, CBS#133246)
M. populorum (strain S02202, CBS#133247)

TAIGA Top most unwanted pathogens
  View in Genbank  

Group Gene Authors Completed submission
Ceratocystis ITS R.C. Hamelin; P. Tanguay; A. Uzunovic; T. Harrington; M. J. Wingfield KC305145 to KC305166
Beta-tubulin R.C. Hamelin; P. Tanguay; A. Uzunovic; T. Harrington; M. J. Wingfield KC589388 to KC589393
EF1a R.C. Hamelin; P. Tanguay; A. Uzunovic; T. Harrington; M. J. Wingfield KC583303 to KC583321
Tsr1 R.C. Hamelin; P. Tanguay; A. Uzunovic; T. Harrington; M. J. Wingfield KC405286 – KC405319 and KC590615 – KC590632
Chalara ITS R.C. Hamelin; P. Tanguay; A. Uzunovic; C. Husson KC481686 to KC481695
Calmodulin R.C. Hamelin; P. Tanguay; A. Uzunovic; C. Husson KC542915 to KC542932
Fusarium ITS R.C. Hamelin; P. Tanguay; A. Uzunovic; K. Siefert KC464615 to KC464634
TEF R.C. Hamelin; P. Tanguay; A. Uzunovic; K. Siefert KC514053 to KC514067
IGS R.C. Hamelin; P. Tanguay; A. Uzunovic; K. Siefert KC147546 to KC147564
Gremmeniella ITS R.C. Hamelin; P. Tanguay; A. Uzunovic; G. Laflamme KC352952 to KC352997
Rpb2 R.C. Hamelin; P. Tanguay; A. Uzunovic; G. Laflamme KC533095 to KC5331
Geosmithia ITS R.C. Hamelin; P. Tanguay; A. Uzunovic; M. Kolarik KF808295-KF808322
Beta-tubulin R.C. Hamelin; P. Tanguay; A. Uzunovic; M. Kolarik KF853893-KF853956
Heterobasidion ITS R.C. Hamelin; P. Tanguay; A. Uzunovic; S. Shamoun KC492893 to KC492960
TF R.C. Hamelin; P. Tanguay; A. Uzunovic; S. Shamoun KC583259 to KC583302
EFA R.C. Hamelin; P. Tanguay; A. Uzunovic; S. Shamoun KC571634 to KC571690
Lachnellula ITS R.C. Hamelin; P. Tanguay; A. Uzunovic KC464635 to KC464645
LSU R.C. Hamelin; P. Tanguay; A. Uzunovic KC492972 to KC492983
Leptographium ITS R.C. Hamelin; P. Tanguay; A. Uzunovic; M. J. Wingfield KF748107-KF748126
Beta-tubulin R.C. Hamelin; P. Tanguay; A. Uzunovic; M. J. Wingfield KF779131-KF779145
Phytophthora ramorum CBEL   KF679684-KF679721
Ophiostoma ITS R.C. Hamelin; P. Tanguay; A. Uzunovic; M. J. Wingfield; L. Bernier KF853995-KF854011
Elongation Factor R.C. Hamelin; P. Tanguay; A. Uzunovic; M. J. Wingfield; L. Bernier KF899867-KF899891
Rosselina ITS R.C. Hamelin; P. Tanguay; A. Uzunovic KF719196-KF719202
LSU R.C. Hamelin; P. Tanguay; A. Uzunovic KF719203-KF719215
Sclerotinia ITS R.C. Hamelin; P. Tanguay; A. Uzunovic KF859918-KF859936
Calmodulin R.C. Hamelin; P. Tanguay; A. Uzunovic KF871364-KF871386
Glyceraldehyde-3-phosphate dehydrogenase R.C. Hamelin; P. Tanguay; A. Uzunovic KF878354-KF878375
Heat shock protein 60 R.C. Hamelin; P. Tanguay; A. Uzunovic KF871387-KF871408
Venturia ITS R.C. Hamelin; P. Tanguay; A. Uzunovic; H. Ishii KF793773-KF793787
Beta-tubulin R.C. Hamelin; P. Tanguay; A. Uzunovic; H. Ishii KF808256-KF808294
Elongation factor R.C. Hamelin; P. Tanguay; A. Uzunovic; H. Ishii KF853957-KF853994

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